Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.08■□□□□ 0.17
UBQLN3Q9H347 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBQLN3Q9H347 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBQLN3Q9H347 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBQLN3Q9H347 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBQLN3Q9H347 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBQLN3Q9H347 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 DDX43P3-201ENST00000441064 443 ntBASIC16.08■□□□□ 0.16
UBQLN3Q9H347 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 FGFR3P6-201ENST00000457012 610 ntBASIC16.08■□□□□ 0.16
UBQLN3Q9H347 AC009078.2-202ENST00000463353 338 ntBASIC16.08■□□□□ 0.16
UBQLN3Q9H347 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 TP73-AS1-207ENST00000624167 988 ntBASIC16.08■□□□□ 0.16
UBQLN3Q9H347 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 NKILA-202ENST00000614771 2598 ntBASIC16.08■□□□□ 0.16
UBQLN3Q9H347 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBQLN3Q9H347 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 SLC25A6P4-201ENST00000586535 553 ntBASIC16.07■□□□□ 0.16
UBQLN3Q9H347 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 AP000867.4-201ENST00000641616 219 ntBASIC16.07■□□□□ 0.16
UBQLN3Q9H347 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBQLN3Q9H347 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 AC011676.5-201ENST00000624864 2660 ntBASIC16.06■□□□□ 0.16
UBQLN3Q9H347 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.06■□□□□ 0.16
UBQLN3Q9H347 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms