Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 TSSC2-201ENST00000450217 709 ntBASIC15.97■□□□□ 0.15
TRIM2Q9C040 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 AC092119.3-201ENST00000612618 583 ntBASIC15.97■□□□□ 0.15
TRIM2Q9C040 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 AC016734.2-201ENST00000624325 1377 ntBASIC15.97■□□□□ 0.15
TRIM2Q9C040 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 AD000864.1-201ENST00000624076 2295 ntBASIC15.97■□□□□ 0.15
TRIM2Q9C040 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRIM2Q9C040 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM2Q9C040 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.96■□□□□ 0.15
TRIM2Q9C040 AL049757.1-201ENST00000616842 1596 ntBASIC15.96■□□□□ 0.15
TRIM2Q9C040 AC046185.3-201ENST00000623228 1824 ntBASIC15.96■□□□□ 0.15
TRIM2Q9C040 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM2Q9C040 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM2Q9C040 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.96■□□□□ 0.14
TRIM2Q9C040 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TRIM2Q9C040 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM2Q9C040 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM2Q9C040 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.96■□□□□ 0.14
TRIM2Q9C040 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 KRT18P1-202ENST00000452408 1331 ntBASIC15.95■□□□□ 0.14
TRIM2Q9C040 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 AL450487.1-201ENST00000426799 995 ntBASIC15.95■□□□□ 0.14
TRIM2Q9C040 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 STK25P1-201ENST00000585406 838 ntBASIC15.95■□□□□ 0.14
TRIM2Q9C040 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.95■□□□□ 0.14
TRIM2Q9C040 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM2Q9C040 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM2Q9C040 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms