Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 MYCLP1-201ENST00000372451 1075 ntBASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 MIR662-201ENST00000384847 95 ntBASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 SLC25A1P3-201ENST00000395415 828 ntBASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 AC111152.3-201ENST00000569699 673 ntBASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 PCDHA14-201ENST00000506751 2298 ntBASIC17.89■□□□□ 0.46
FOXP3Q9BZS1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.89■□□□□ 0.46
FOXP3Q9BZS1 AC093525.9-201ENST00000624961 1746 ntBASIC17.89■□□□□ 0.46
FOXP3Q9BZS1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
FOXP3Q9BZS1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 AC097374.2-201ENST00000618617 1306 ntBASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXP3Q9BZS1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 LINC00265-3P-201ENST00000447588 903 ntBASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 AP000867.3-201ENST00000524675 377 ntBASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 AC124947.2-201ENST00000547118 1133 ntBASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXP3Q9BZS1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms