Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 TERF1P1-201ENST00000311003 1181 ntBASIC10.37□□□□□ -0.75
LIMD2Q9BT23 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 CD70-202ENST00000423145 881 ntTSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 AL359075.1-203ENST00000462729 1002 ntBASIC10.37□□□□□ -0.75
LIMD2Q9BT23 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 SPEG-225ENST00000617028 815 ntTSL 5 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LIMD2Q9BT23 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 NKILA-202ENST00000614771 2598 ntBASIC10.36□□□□□ -0.75
LIMD2Q9BT23 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 RNF152P1-201ENST00000397754 604 ntBASIC10.36□□□□□ -0.75
LIMD2Q9BT23 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 TSPY12P-201ENST00000421279 868 ntBASIC10.36□□□□□ -0.75
LIMD2Q9BT23 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms