Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 AL162727.3-201ENST00000635661 2787 ntBASIC16.13■□□□□ 0.17
TM9SF2Q99805 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TM9SF2Q99805 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.13■□□□□ 0.17
TM9SF2Q99805 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF2Q99805 KRT16P4-201ENST00000453883 522 ntBASIC16.13■□□□□ 0.17
TM9SF2Q99805 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.13■□□□□ 0.17
TM9SF2Q99805 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.13■□□□□ 0.17
TM9SF2Q99805 AL353801.3-201ENST00000609898 542 ntBASIC16.13■□□□□ 0.17
TM9SF2Q99805 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TM9SF2Q99805 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TM9SF2Q99805 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 UBALD1-205ENST00000590891 2641 ntBASIC16.13■□□□□ 0.17
TM9SF2Q99805 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF2Q99805 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 AL118508.1-201ENST00000613502 2345 ntBASIC16.12■□□□□ 0.17
TM9SF2Q99805 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF2Q99805 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF2Q99805 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF2Q99805 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF2Q99805 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 POM121L3P-201ENST00000419331 1163 ntBASIC16.12■□□□□ 0.17
TM9SF2Q99805 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF2Q99805 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF2Q99805 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF2Q99805 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF2Q99805 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 AL845331.1-201ENST00000424978 1190 ntBASIC16.11■□□□□ 0.17
TM9SF2Q99805 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 AL732292.2-201ENST00000609649 430 ntBASIC16.11■□□□□ 0.17
TM9SF2Q99805 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TM9SF2Q99805 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF2Q99805 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 LINC01126-201ENST00000623515 1646 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms