Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 KRT18P65-201ENST00000439811 1286 ntBASIC11.54□□□□□ -0.56
LITAFQ99732 MFAP1P1-201ENST00000442257 1255 ntBASIC11.54□□□□□ -0.56
LITAFQ99732 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC11.54□□□□□ -0.56
LITAFQ99732 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC11.54□□□□□ -0.56
LITAFQ99732 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LITAFQ99732 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LITAFQ99732 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
LITAFQ99732 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.54□□□□□ -0.56
LITAFQ99732 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.54□□□□□ -0.56
LITAFQ99732 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LITAFQ99732 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.53□□□□□ -0.56
LITAFQ99732 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
LITAFQ99732 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC11.53□□□□□ -0.56
LITAFQ99732 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LITAFQ99732 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LITAFQ99732 AC006058.4-201ENST00000624016 1670 ntBASIC11.53□□□□□ -0.56
LITAFQ99732 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 FSCN1P1-201ENST00000568912 1481 ntBASIC11.53□□□□□ -0.56
LITAFQ99732 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC11.53□□□□□ -0.56
LITAFQ99732 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC11.53□□□□□ -0.56
LITAFQ99732 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC11.53□□□□□ -0.56
LITAFQ99732 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC11.53□□□□□ -0.56
LITAFQ99732 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 AC124016.1-201ENST00000609552 612 ntBASIC11.53□□□□□ -0.56
LITAFQ99732 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 PFKL-212ENST00000628044 129 ntTSL 3 BASIC11.53□□□□□ -0.56
LITAFQ99732 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.53□□□□□ -0.56
LITAFQ99732 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
LITAFQ99732 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LITAFQ99732 AL603832.2-201ENST00000566195 2125 ntBASIC11.53□□□□□ -0.56
LITAFQ99732 FAM45BP-202ENST00000592932 1624 ntBASIC11.53□□□□□ -0.56
LITAFQ99732 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LITAFQ99732 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.52□□□□□ -0.56
LITAFQ99732 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LITAFQ99732 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LITAFQ99732 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.52□□□□□ -0.56
LITAFQ99732 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LITAFQ99732 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC11.52□□□□□ -0.56
LITAFQ99732 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LITAFQ99732 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
LITAFQ99732 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.52□□□□□ -0.56
LITAFQ99732 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC11.52□□□□□ -0.56
LITAFQ99732 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
LITAFQ99732 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LITAFQ99732 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.52□□□□□ -0.57
LITAFQ99732 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 AC073347.1-201ENST00000421633 2643 ntBASIC11.52□□□□□ -0.57
LITAFQ99732 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms