Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC007389.4-201ENST00000454674 793 ntBASIC17.87■□□□□ 0.45
CDX2Q99626 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.87■□□□□ 0.45
CDX2Q99626 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.87■□□□□ 0.45
CDX2Q99626 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.87■□□□□ 0.45
CDX2Q99626 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CDX2Q99626 AL139099.5-201ENST00000635274 300 ntBASIC17.87■□□□□ 0.45
CDX2Q99626 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.87■□□□□ 0.45
CDX2Q99626 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.87■□□□□ 0.45
CDX2Q99626 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.87■□□□□ 0.45
CDX2Q99626 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDX2Q99626 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CDX2Q99626 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.87■□□□□ 0.45
CDX2Q99626 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDX2Q99626 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.87■□□□□ 0.45
CDX2Q99626 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDX2Q99626 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDX2Q99626 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 AC093484.2-201ENST00000580996 2166 ntBASIC17.86■□□□□ 0.45
CDX2Q99626 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.86■□□□□ 0.45
CDX2Q99626 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.86■□□□□ 0.45
CDX2Q99626 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDX2Q99626 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.86■□□□□ 0.45
CDX2Q99626 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.86■□□□□ 0.45
CDX2Q99626 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.86■□□□□ 0.45
CDX2Q99626 MYCLP2-201ENST00000449268 967 ntBASIC17.86■□□□□ 0.45
CDX2Q99626 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDX2Q99626 MIR6727-201ENST00000620702 65 ntBASIC17.86■□□□□ 0.45
CDX2Q99626 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.86■□□□□ 0.45
CDX2Q99626 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CDX2Q99626 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CDX2Q99626 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.86■□□□□ 0.45
CDX2Q99626 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.86■□□□□ 0.45
CDX2Q99626 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDX2Q99626 PCDHAC2-203ENST00000615316 3011 ntBASIC17.85■□□□□ 0.45
CDX2Q99626 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CDX2Q99626 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CDX2Q99626 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDX2Q99626 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.85■□□□□ 0.45
CDX2Q99626 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 AL157384.1-201ENST00000445995 2473 ntBASIC17.85■□□□□ 0.45
CDX2Q99626 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDX2Q99626 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.85■□□□□ 0.45
CDX2Q99626 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.85■□□□□ 0.45
CDX2Q99626 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDX2Q99626 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDX2Q99626 CTBP2P3-201ENST00000585629 1255 ntBASIC17.85■□□□□ 0.45
CDX2Q99626 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 AL031055.1-201ENST00000606362 631 ntBASIC17.85■□□□□ 0.45
CDX2Q99626 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.85■□□□□ 0.45
CDX2Q99626 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDX2Q99626 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CDX2Q99626 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.84■□□□□ 0.45
CDX2Q99626 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDX2Q99626 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDX2Q99626 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.84■□□□□ 0.45
CDX2Q99626 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDX2Q99626 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDX2Q99626 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
CDX2Q99626 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDX2Q99626 RNU1-129P-201ENST00000384064 167 ntBASIC17.84■□□□□ 0.45
CDX2Q99626 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.84■□□□□ 0.45
CDX2Q99626 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.84■□□□□ 0.45
CDX2Q99626 RNA5SP423-201ENST00000517127 109 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms