Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 SPDYE7P-202ENST00000420373 878 ntBASIC21■□□□□ 0.95
CRAMP1Q96RY5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 UGT1A2P-201ENST00000454886 866 ntBASIC21■□□□□ 0.95
CRAMP1Q96RY5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 AC087641.1-201ENST00000557561 1021 ntBASIC21■□□□□ 0.95
CRAMP1Q96RY5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 TERF1P3-201ENST00000505638 1227 ntBASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 AL353732.1-201ENST00000569618 1459 ntBASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.99■□□□□ 0.95
CRAMP1Q96RY5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 TREML5P-201ENST00000421694 576 ntBASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRAMP1Q96RY5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 WASH6P-202ENST00000359512 1437 ntBASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 HCG4-201ENST00000418983 998 ntBASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 FAM207CP-201ENST00000443486 507 ntBASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 AL158211.3-201ENST00000607385 239 ntBASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms