Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 AL590627.1-203ENST00000421194 1026 ntBASIC17.85■□□□□ 0.45
RPRD1AQ96P16 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 AP002414.3-201ENST00000589352 1468 ntBASIC17.85■□□□□ 0.45
RPRD1AQ96P16 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 MIR1199-201ENST00000621445 119 ntBASIC17.85■□□□□ 0.45
RPRD1AQ96P16 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 AC005332.8-201ENST00000622750 2735 ntBASIC17.85■□□□□ 0.45
RPRD1AQ96P16 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RPRD1AQ96P16 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 AC120114.3-201ENST00000611923 658 ntBASIC17.84■□□□□ 0.45
RPRD1AQ96P16 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPRD1AQ96P16 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPRD1AQ96P16 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.83■□□□□ 0.45
RPRD1AQ96P16 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RPRD1AQ96P16 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPRD1AQ96P16 IL9RP2-201ENST00000423948 1312 ntBASIC17.83■□□□□ 0.44
RPRD1AQ96P16 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.83■□□□□ 0.44
RPRD1AQ96P16 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 ELK2BP-201ENST00000415014 1224 ntBASIC17.83■□□□□ 0.44
RPRD1AQ96P16 KRT18P27-201ENST00000427733 1299 ntBASIC17.83■□□□□ 0.44
RPRD1AQ96P16 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 AL356488.2-201ENST00000602755 427 ntBASIC17.83■□□□□ 0.44
RPRD1AQ96P16 AL353135.1-201ENST00000606729 504 ntBASIC17.83■□□□□ 0.44
RPRD1AQ96P16 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms