Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 SPTLC1P1-201ENST00000447199 261 ntBASIC20.06■□□□□ 0.8
CDCA5Q96FF9 KRT17P7-201ENST00000451704 1104 ntBASIC20.06■□□□□ 0.8
CDCA5Q96FF9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 AC022144.1-201ENST00000602255 1580 ntBASIC20.06■□□□□ 0.8
CDCA5Q96FF9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.06■□□□□ 0.8
CDCA5Q96FF9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.05■□□□□ 0.8
CDCA5Q96FF9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA5Q96FF9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 CU639417.3-201ENST00000624240 1404 ntBASIC20.04■□□□□ 0.8
CDCA5Q96FF9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 U91328.1-201ENST00000437528 223 ntBASIC20.04■□□□□ 0.8
CDCA5Q96FF9 AC022494.1-201ENST00000466044 728 ntBASIC20.04■□□□□ 0.8
CDCA5Q96FF9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 SPDYE12P-201ENST00000618416 771 ntBASIC20.04■□□□□ 0.8
CDCA5Q96FF9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA5Q96FF9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA5Q96FF9 WIZP1-201ENST00000531444 2299 ntBASIC20.02■□□□□ 0.8
CDCA5Q96FF9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms