Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 AC108073.2-201ENST00000464002 357 ntBASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 AC108751.1-201ENST00000490852 363 ntBASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 AL671883.3-201ENST00000603274 991 ntBASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 GGTLC5P-201ENST00000617623 998 ntBASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 PCDHB18P-201ENST00000524813 2368 ntBASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 ZNF259P1-201ENST00000407656 1365 ntBASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ECHDC3Q96DC8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ECHDC3Q96DC8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.27■□□□□ 0.35
ECHDC3Q96DC8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ECHDC3Q96DC8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.27■□□□□ 0.35
ECHDC3Q96DC8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.27■□□□□ 0.35
ECHDC3Q96DC8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ECHDC3Q96DC8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.27■□□□□ 0.35
ECHDC3Q96DC8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 AC141586.5-201ENST00000624546 2050 ntBASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ECHDC3Q96DC8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 PI4KAP1-204ENST00000612579 1703 ntBASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 MIR574-201ENST00000385209 96 ntBASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 PRSS29P-201ENST00000440800 595 ntBASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms