Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 AC010203.1-204ENST00000548782 407 ntBASIC16.69■□□□□ 0.26
VPS33AQ96AX1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VPS33AQ96AX1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.68■□□□□ 0.26
VPS33AQ96AX1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.68■□□□□ 0.26
VPS33AQ96AX1 AP003733.1-201ENST00000491725 852 ntBASIC16.68■□□□□ 0.26
VPS33AQ96AX1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 AC092171.3-201ENST00000610122 2651 ntBASIC16.68■□□□□ 0.26
VPS33AQ96AX1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS33AQ96AX1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 FAM8A6P-201ENST00000407496 1135 ntBASIC16.67■□□□□ 0.26
VPS33AQ96AX1 AC096633.1-201ENST00000422446 749 ntBASIC16.67■□□□□ 0.26
VPS33AQ96AX1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 COX11P1-201ENST00000489116 835 ntBASIC16.67■□□□□ 0.26
VPS33AQ96AX1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 AC010460.3-201ENST00000511359 1579 ntBASIC16.67■□□□□ 0.26
VPS33AQ96AX1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms