Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 LINC00304-203ENST00000565008 1864 ntBASIC22.56■■□□□ 1.2
RAPGEF4Q8WZA2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
RAPGEF4Q8WZA2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 AC092474.2-201ENST00000424288 719 ntBASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 AC243562.1-201ENST00000560672 389 ntBASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 AL135744.1-201ENST00000565098 629 ntBASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 RARRES2P8-201ENST00000566335 367 ntBASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF4Q8WZA2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 LYSMD4-203ENST00000378904 2122 ntBASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 KRT18P32-201ENST00000424695 1287 ntBASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 COX20P2-201ENST00000452636 358 ntBASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 DUX4L27-201ENST00000554796 1261 ntBASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 AKAP8P1-201ENST00000434743 1349 ntBASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF4Q8WZA2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 ABALON-201ENST00000629058 1903 ntBASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 CNN2P2-201ENST00000443536 909 ntBASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 CNN2P3-201ENST00000450201 906 ntBASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 AC069335.1-201ENST00000489972 472 ntBASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 AL390955.2-201ENST00000603032 514 ntBASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 AL136317.3-201ENST00000618497 906 ntBASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF4Q8WZA2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPGEF4Q8WZA2 HMGA1P7-201ENST00000406908 502 ntBASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms