Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 GK-202ENST00000378941 458 ntTSL 3 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 TSSK5P-201ENST00000423978 907 ntBASIC20.87■□□□□ 0.93
SNED1Q8TER0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 AC005412.3-201ENST00000580309 715 ntBASIC20.87■□□□□ 0.93
SNED1Q8TER0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 AL354751.1-201ENST00000412768 1863 ntBASIC20.86■□□□□ 0.93
SNED1Q8TER0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.86■□□□□ 0.93
SNED1Q8TER0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.86■□□□□ 0.93
SNED1Q8TER0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNED1Q8TER0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 SPDYE7P-202ENST00000420373 878 ntBASIC20.85■□□□□ 0.93
SNED1Q8TER0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 SERBP1P5-201ENST00000510079 1181 ntBASIC20.85■□□□□ 0.93
SNED1Q8TER0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 AP000842.3-202ENST00000569238 1080 ntBASIC20.85■□□□□ 0.93
SNED1Q8TER0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNED1Q8TER0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SNED1Q8TER0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.84■□□□□ 0.93
SNED1Q8TER0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms