Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 MCCD1P2-201ENST00000423228 335 ntBASIC21.56■■□□□ 1.04
LINS1Q8NG48 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
LINS1Q8NG48 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.56■■□□□ 1.04
LINS1Q8NG48 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.56■■□□□ 1.04
LINS1Q8NG48 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.56■■□□□ 1.04
LINS1Q8NG48 ACTL9-202ENST00000612068 1252 ntBASIC21.56■■□□□ 1.04
LINS1Q8NG48 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.56■■□□□ 1.04
LINS1Q8NG48 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.56■■□□□ 1.04
LINS1Q8NG48 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.56■■□□□ 1.04
LINS1Q8NG48 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LINS1Q8NG48 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINS1Q8NG48 AC129492.6-201ENST00000611383 1305 ntBASIC21.55■■□□□ 1.04
LINS1Q8NG48 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 PP12613-201ENST00000424958 2230 ntBASIC21.55■■□□□ 1.04
LINS1Q8NG48 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 AC107918.2-201ENST00000530817 355 ntBASIC21.55■■□□□ 1.04
LINS1Q8NG48 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 GPALPP1-207ENST00000611650 899 ntBASIC21.55■■□□□ 1.04
LINS1Q8NG48 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.55■■□□□ 1.04
LINS1Q8NG48 AC004877.2-201ENST00000623941 599 ntBASIC21.55■■□□□ 1.04
LINS1Q8NG48 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.55■■□□□ 1.04
LINS1Q8NG48 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINS1Q8NG48 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.55■■□□□ 1.04
LINS1Q8NG48 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 RPSAP43-201ENST00000402237 625 ntBASIC21.54■■□□□ 1.04
LINS1Q8NG48 UPF3AP3-201ENST00000420996 769 ntBASIC21.54■■□□□ 1.04
LINS1Q8NG48 GPX1P2-201ENST00000429271 606 ntBASIC21.54■■□□□ 1.04
LINS1Q8NG48 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 DNAJB3-201ENST00000446806 729 ntBASIC21.54■■□□□ 1.04
LINS1Q8NG48 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 AC139530.3-201ENST00000620344 690 ntBASIC21.54■■□□□ 1.04
LINS1Q8NG48 REXO1L3P-201ENST00000622202 1288 ntBASIC21.54■■□□□ 1.04
LINS1Q8NG48 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
LINS1Q8NG48 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINS1Q8NG48 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms