Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 AC099398.1-201ENST00000567919 2776 ntBASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 PRYP5-201ENST00000451909 266 ntBASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 AP001269.4-201ENST00000609611 512 ntBASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 AL732292.2-201ENST00000609649 430 ntBASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 AL139288.1-201ENST00000623748 933 ntBASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SRFBP1Q8NEF9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 AC116353.5-201ENST00000638148 1699 ntBASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 AL135999.2-201ENST00000622438 1686 ntBASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SRFBP1Q8NEF9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms