Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 SLC25A6P5-201ENST00000435663 894 ntBASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A9Q8NBW4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 BCAR1-209ENST00000546196 1340 ntBASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 AC211486.1-202ENST00000416371 468 ntBASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 DNAJB3-202ENST00000449667 1266 ntBASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 PAWRP1-201ENST00000451083 565 ntBASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 AC211476.1-201ENST00000503899 468 ntBASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 YBX1P5-201ENST00000509441 847 ntBASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 KRT19P2-202ENST00000557173 1012 ntBASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 AC025580.3-201ENST00000617932 1424 ntBASIC16.28■□□□□ 0.2
SLC38A9Q8NBW4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 PDPK2P-202ENST00000562415 1191 ntBASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 MIR4469-201ENST00000583919 79 ntBASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 AL078644.1-201ENST00000609881 752 ntBASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 C20orf181-201ENST00000623918 480 ntBASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SLC38A9Q8NBW4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC38A9Q8NBW4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC38A9Q8NBW4 HTR5BP-201ENST00000430851 1154 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms