Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC096633.1-201ENST00000422446 749 ntBASIC17.85■□□□□ 0.45
PAF1Q8N7H5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 SIRPAP1-201ENST00000448467 1770 ntBASIC17.85■□□□□ 0.45
PAF1Q8N7H5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 AC011467.2-201ENST00000598425 242 ntBASIC17.85■□□□□ 0.45
PAF1Q8N7H5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAF1Q8N7H5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 TPM4P1-201ENST00000436100 807 ntBASIC17.84■□□□□ 0.45
PAF1Q8N7H5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 IGHV3-52-201ENST00000519770 353 ntBASIC17.84■□□□□ 0.45
PAF1Q8N7H5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 NOC2LP1-202ENST00000452600 2235 ntBASIC17.84■□□□□ 0.45
PAF1Q8N7H5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PAF1Q8N7H5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAF1Q8N7H5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 AC132008.2-207ENST00000454517 770 ntBASIC17.83■□□□□ 0.44
PAF1Q8N7H5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
PAF1Q8N7H5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 AC103564.2-201ENST00000432853 1299 ntBASIC17.82■□□□□ 0.44
PAF1Q8N7H5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PAF1Q8N7H5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms