Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 AC004951.3-201ENST00000418645 1148 ntBASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 AC091390.4-202ENST00000476426 537 ntBASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 LINC01451-201ENST00000623792 534 ntBASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 RNF216P1-203ENST00000404404 2427 ntBASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CROCCP3Q8IVE0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 SLC29A4P1-201ENST00000398760 971 ntBASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 AC004980.1-204ENST00000429707 299 ntBASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CROCCP3Q8IVE0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms