Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 CNN2P2-201ENST00000443536 909 ntBASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 CNN2P3-201ENST00000450201 906 ntBASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 AC243562.1-201ENST00000560672 389 ntBASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 AC005412.3-201ENST00000580309 715 ntBASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 AL136317.3-201ENST00000618497 906 ntBASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
NPAS4Q8IUM7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 LYSMD4-203ENST00000378904 2122 ntBASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 KRT18P32-201ENST00000424695 1287 ntBASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 AC069335.1-201ENST00000489972 472 ntBASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 AL161645.1-201ENST00000622716 1255 ntBASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.43■□□□□ 0.54
NPAS4Q8IUM7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 AC087289.5-201ENST00000586076 3175 ntBASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 HMGA1P7-201ENST00000406908 502 ntBASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 AC092474.2-201ENST00000424288 719 ntBASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 COX20P2-201ENST00000452636 358 ntBASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 AL512356.2-201ENST00000546955 174 ntBASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms