Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 DNAJB3-202ENST00000449667 1266 ntBASIC19.28■□□□□ 0.68
TRIM50Q86XT4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 AC004877.2-201ENST00000623941 599 ntBASIC19.28■□□□□ 0.68
TRIM50Q86XT4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM50Q86XT4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 LYSMD4-203ENST00000378904 2122 ntBASIC19.27■□□□□ 0.68
TRIM50Q86XT4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 GGTLC5P-201ENST00000617623 998 ntBASIC19.27■□□□□ 0.68
TRIM50Q86XT4 LINC01451-201ENST00000623792 534 ntBASIC19.27■□□□□ 0.68
TRIM50Q86XT4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM50Q86XT4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.27■□□□□ 0.67
TRIM50Q86XT4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM50Q86XT4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.27■□□□□ 0.67
TRIM50Q86XT4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM50Q86XT4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM50Q86XT4 BCAR1-209ENST00000546196 1340 ntBASIC19.26■□□□□ 0.67
TRIM50Q86XT4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM50Q86XT4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM50Q86XT4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM50Q86XT4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRIM50Q86XT4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM50Q86XT4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM50Q86XT4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms