Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 HBZP1-201ENST00000354915 429 ntBASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 KRT18P57-201ENST00000443599 1254 ntBASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 MTCL1P1-201ENST00000446207 792 ntBASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 AC112907.2-201ENST00000448639 330 ntBASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 LINC01023-201ENST00000606054 436 ntBASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 AC012313.1-201ENST00000593393 3059 ntBASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 LINC01311-201ENST00000565162 1445 ntBASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AC073508.3-201ENST00000619697 1419 ntBASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 LINC01238-205ENST00000567549 1107 ntBASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AC005332.3-201ENST00000589904 676 ntBASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms