Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COPS6Q7L5N1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.75■■□□□ 1.07
COPS6Q7L5N1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.75■■□□□ 1.07
COPS6Q7L5N1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COPS6Q7L5N1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COPS6Q7L5N1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COPS6Q7L5N1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 SNHG9-202ENST00000564014 471 ntBASIC21.74■■□□□ 1.07
COPS6Q7L5N1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 AP002472.1-201ENST00000577490 586 ntBASIC21.74■■□□□ 1.07
COPS6Q7L5N1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 AC092902.6-201ENST00000641783 218 ntBASIC21.74■■□□□ 1.07
COPS6Q7L5N1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPS6Q7L5N1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS6Q7L5N1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 AC068137.2-201ENST00000605408 478 ntBASIC21.72■■□□□ 1.07
COPS6Q7L5N1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 AC018470.1-201ENST00000624790 3129 ntBASIC21.72■■□□□ 1.07
COPS6Q7L5N1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.72■■□□□ 1.07
COPS6Q7L5N1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.71■■□□□ 1.07
COPS6Q7L5N1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms