Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 COBL-210ENST00000632460 1941 ntTSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
LCA10Q71F78 PNMA6B-201ENST00000538162 1200 ntBASIC9.39□□□□□ -0.91
LCA10Q71F78 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC9.39□□□□□ -0.91
LCA10Q71F78 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC9.39□□□□□ -0.91
LCA10Q71F78 HLA-B-256ENST00000639848 1089 ntBASIC9.39□□□□□ -0.91
LCA10Q71F78 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 AC138028.4-201ENST00000564984 1845 ntBASIC9.39□□□□□ -0.91
LCA10Q71F78 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 OR2I1P-210ENST00000642037 4691 ntBASIC9.39□□□□□ -0.91
LCA10Q71F78 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 TET3-201ENST00000305799 5174 ntTSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LCA10Q71F78 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LCA10Q71F78 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
LCA10Q71F78 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LCA10Q71F78 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 KCP-203ENST00000610776 5108 ntTSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 AL161772.1-201ENST00000610494 4412 ntBASIC9.38□□□□□ -0.91
LCA10Q71F78 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 AC007191.1-201ENST00000623179 2995 ntBASIC9.38□□□□□ -0.91
LCA10Q71F78 MYO15B-237ENST00000642007 4893 ntBASIC9.38□□□□□ -0.91
LCA10Q71F78 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms