Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 CU639417.3-201ENST00000624240 1404 ntBASIC14.28□□□□□ -0.12
VPS13CQ709C8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 RN7SL692P-201ENST00000464677 288 ntBASIC14.28□□□□□ -0.12
VPS13CQ709C8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 AC079776.1-201ENST00000401540 1152 ntBASIC14.28□□□□□ -0.12
VPS13CQ709C8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 AC004408.2-201ENST00000623613 2777 ntBASIC14.28□□□□□ -0.12
VPS13CQ709C8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13CQ709C8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS13CQ709C8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13CQ709C8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13CQ709C8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13CQ709C8 RPS2P32-201ENST00000439199 892 ntBASIC14.27□□□□□ -0.12
VPS13CQ709C8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13CQ709C8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS13CQ709C8 AP000842.3-202ENST00000569238 1080 ntBASIC14.27□□□□□ -0.12
VPS13CQ709C8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS13CQ709C8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VPS13CQ709C8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13CQ709C8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13CQ709C8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS13CQ709C8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS13CQ709C8 DDX43P3-201ENST00000441064 443 ntBASIC14.27□□□□□ -0.13
VPS13CQ709C8 ATP5G2P4-201ENST00000442175 420 ntBASIC14.27□□□□□ -0.13
VPS13CQ709C8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13CQ709C8 AC116407.2-201ENST00000613639 860 ntBASIC14.27□□□□□ -0.13
VPS13CQ709C8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13CQ709C8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13CQ709C8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13CQ709C8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
VPS13CQ709C8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13CQ709C8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13CQ709C8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13CQ709C8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 AC069120.2-201ENST00000524091 540 ntBASIC14.26□□□□□ -0.13
VPS13CQ709C8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 FAM86C2P-203ENST00000528684 1004 ntBASIC14.26□□□□□ -0.13
VPS13CQ709C8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms