Protein–RNA interactions for Protein: Q6P1K2

PMF1, Polyamine-modulated factor 1, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1Q6P1K2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.22■□□□□ 0.51
PMF1Q6P1K2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PMF1Q6P1K2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMF1Q6P1K2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMF1Q6P1K2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMF1Q6P1K2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 LAGE3P1-201ENST00000425356 484 ntBASIC18.21■□□□□ 0.51
PMF1Q6P1K2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 AC012640.2-201ENST00000561606 901 ntBASIC18.21■□□□□ 0.51
PMF1Q6P1K2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 AL049840.3-201ENST00000602669 611 ntBASIC18.21■□□□□ 0.51
PMF1Q6P1K2 AL773604.1-201ENST00000617417 272 ntBASIC18.21■□□□□ 0.51
PMF1Q6P1K2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.21■□□□□ 0.51
PMF1Q6P1K2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PMF1Q6P1K2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PMF1Q6P1K2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 AC012313.1-201ENST00000593393 3059 ntBASIC18.2■□□□□ 0.5
PMF1Q6P1K2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 AL031284.1-201ENST00000419297 478 ntBASIC18.2■□□□□ 0.5
PMF1Q6P1K2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 FDX1P1-201ENST00000449115 551 ntBASIC18.2■□□□□ 0.5
PMF1Q6P1K2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 AL139424.1-201ENST00000607572 797 ntBASIC18.2■□□□□ 0.5
PMF1Q6P1K2 FAM215A-202ENST00000632077 792 ntBASIC18.2■□□□□ 0.5
PMF1Q6P1K2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 HLA-A-201ENST00000376802 1334 ntBASIC18.2■□□□□ 0.5
PMF1Q6P1K2 AL590787.1-201ENST00000568856 1315 ntBASIC18.2■□□□□ 0.5
PMF1Q6P1K2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMF1Q6P1K2 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.19■□□□□ 0.5
PMF1Q6P1K2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 KRT18P27-201ENST00000427733 1299 ntBASIC18.19■□□□□ 0.5
PMF1Q6P1K2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMF1Q6P1K2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PMF1Q6P1K2 AP001094.4-201ENST00000579008 2176 ntBASIC18.18■□□□□ 0.5
PMF1Q6P1K2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PMF1Q6P1K2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PMF1Q6P1K2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.18■□□□□ 0.5
PMF1Q6P1K2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PMF1Q6P1K2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms