Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 AC116353.5-201ENST00000638148 1699 ntBASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 AC018712.1-201ENST00000455767 687 ntBASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 RNPS1P1-201ENST00000507437 918 ntBASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 AL589182.2-201ENST00000619332 1049 ntBASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 AC141586.5-201ENST00000624546 2050 ntBASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 KRT18P67-201ENST00000432816 1264 ntBASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 AC073648.2-201ENST00000510116 352 ntBASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 AC097637.2-201ENST00000624096 1997 ntBASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP4R3AQ6IN85 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 AC064862.7-201ENST00000604520 867 ntBASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 NCF1C-201ENST00000438382 1427 ntBASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4R3AQ6IN85 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 AC139713.2-201ENST00000641328 2723 ntBASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 SLC25A1P3-201ENST00000395415 828 ntBASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PPP4R3AQ6IN85 AC107918.4-202ENST00000641623 219 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms