Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF220Q5VTB9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF220Q5VTB9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF220Q5VTB9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF220Q5VTB9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RNF220Q5VTB9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF220Q5VTB9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF220Q5VTB9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
RNF220Q5VTB9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 AC104640.1-201ENST00000562617 2109 ntBASIC16.74■□□□□ 0.27
RNF220Q5VTB9 AC145285.6-201ENST00000604632 637 ntBASIC16.74■□□□□ 0.27
RNF220Q5VTB9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RNF220Q5VTB9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.73■□□□□ 0.27
RNF220Q5VTB9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 AL513523.2-202ENST00000427283 2040 ntBASIC16.73■□□□□ 0.27
RNF220Q5VTB9 AC060834.1-201ENST00000443027 2032 ntBASIC16.73■□□□□ 0.27
RNF220Q5VTB9 AC092068.3-201ENST00000587894 2016 ntBASIC16.73■□□□□ 0.27
RNF220Q5VTB9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF220Q5VTB9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF220Q5VTB9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
RNF220Q5VTB9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF220Q5VTB9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF220Q5VTB9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms