Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 AL121772.3-201ENST00000610840 674 ntBASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO1Q2MKA7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 RBM17P3-201ENST00000417687 1192 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 LINC00982-205ENST00000420957 435 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 BX005266.1-201ENST00000473402 457 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 AC091304.2-201ENST00000564639 760 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 MTDHP3-201ENST00000594186 672 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 AC064862.7-201ENST00000604520 867 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 AL355877.3-201ENST00000622820 899 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 AC084018.2-201ENST00000613093 2607 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 FLJ38576-201ENST00000623820 2459 ntBASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO1Q2MKA7 RNF216P1-203ENST00000404404 2427 ntBASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 AC012313.10-201ENST00000623509 926 ntBASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO1Q2MKA7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO1Q2MKA7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO1Q2MKA7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
RSPO1Q2MKA7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO1Q2MKA7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO1Q2MKA7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.96□□□□□ -0.02
RSPO1Q2MKA7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO1Q2MKA7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms