Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GABREP78334 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GABREP78334 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.43■□□□□ 0.22
GABREP78334 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
GABREP78334 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.42■□□□□ 0.22
GABREP78334 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GABREP78334 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.42■□□□□ 0.22
GABREP78334 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
GABREP78334 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 PMS2P4-201ENST00000412466 1052 ntBASIC16.42■□□□□ 0.22
GABREP78334 FAM185BP-201ENST00000443595 716 ntBASIC16.42■□□□□ 0.22
GABREP78334 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GABREP78334 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.42■□□□□ 0.22
GABREP78334 AC002558.1-201ENST00000488906 803 ntBASIC16.42■□□□□ 0.22
GABREP78334 AC093214.1-201ENST00000511688 1107 ntBASIC16.42■□□□□ 0.22
GABREP78334 RNA5SP421-201ENST00000516864 134 ntBASIC16.42■□□□□ 0.22
GABREP78334 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 AC093520.2-201ENST00000561830 333 ntBASIC16.42■□□□□ 0.22
GABREP78334 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.42■□□□□ 0.22
GABREP78334 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.42■□□□□ 0.22
GABREP78334 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.42■□□□□ 0.22
GABREP78334 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 AC135050.7-201ENST00000624508 2218 ntBASIC16.42■□□□□ 0.22
GABREP78334 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.42■□□□□ 0.22
GABREP78334 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.42■□□□□ 0.22
GABREP78334 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABREP78334 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
GABREP78334 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.41■□□□□ 0.22
GABREP78334 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
GABREP78334 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.41■□□□□ 0.22
GABREP78334 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.41■□□□□ 0.22
GABREP78334 AC002056.1-201ENST00000395613 760 ntBASIC16.41■□□□□ 0.22
GABREP78334 AL627223.1-201ENST00000416693 442 ntBASIC16.41■□□□□ 0.22
GABREP78334 ACTG1P4-201ENST00000425123 1122 ntBASIC16.41■□□□□ 0.22
GABREP78334 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.41■□□□□ 0.22
GABREP78334 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.41■□□□□ 0.22
GABREP78334 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.41■□□□□ 0.22
GABREP78334 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
GABREP78334 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 AC190387.1-201ENST00000551683 408 ntBASIC16.41■□□□□ 0.22
GABREP78334 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.41■□□□□ 0.22
GABREP78334 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
GABREP78334 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.41■□□□□ 0.22
GABREP78334 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 AJ011932.1-201ENST00000621707 465 ntBASIC16.41■□□□□ 0.22
GABREP78334 AC009093.7-201ENST00000623853 1223 ntBASIC16.41■□□□□ 0.22
GABREP78334 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.41■□□□□ 0.22
GABREP78334 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
GABREP78334 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GABREP78334 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 AL590787.1-201ENST00000568856 1315 ntBASIC16.41■□□□□ 0.22
GABREP78334 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABREP78334 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms