Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.87■□□□□ 0.77
HMGCS2P54868 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS2P54868 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS2P54868 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS2P54868 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
HMGCS2P54868 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS2P54868 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCS2P54868 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS2P54868 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCS2P54868 TFAMP1-201ENST00000412727 736 ntBASIC19.86■□□□□ 0.77
HMGCS2P54868 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS2P54868 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCS2P54868 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS2P54868 DUX4L27-201ENST00000554796 1261 ntBASIC19.86■□□□□ 0.77
HMGCS2P54868 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCS2P54868 AC243562.1-201ENST00000560672 389 ntBASIC19.86■□□□□ 0.77
HMGCS2P54868 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCS2P54868 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCS2P54868 AL390955.2-201ENST00000603032 514 ntBASIC19.86■□□□□ 0.77
HMGCS2P54868 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HMGCS2P54868 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCS2P54868 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS2P54868 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS2P54868 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS2P54868 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
HMGCS2P54868 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HMGCS2P54868 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HMGCS2P54868 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
HMGCS2P54868 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCS2P54868 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCS2P54868 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCS2P54868 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.85■□□□□ 0.77
HMGCS2P54868 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGCS2P54868 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.85■□□□□ 0.77
HMGCS2P54868 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGCS2P54868 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.85■□□□□ 0.77
HMGCS2P54868 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.85■□□□□ 0.77
HMGCS2P54868 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.85■□□□□ 0.77
HMGCS2P54868 AL135744.1-201ENST00000565098 629 ntBASIC19.85■□□□□ 0.77
HMGCS2P54868 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.85■□□□□ 0.77
HMGCS2P54868 MIR4515-201ENST00000584082 81 ntBASIC19.85■□□□□ 0.77
HMGCS2P54868 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCS2P54868 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS2P54868 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
HMGCS2P54868 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.84■□□□□ 0.77
HMGCS2P54868 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCS2P54868 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HMGCS2P54868 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HMGCS2P54868 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HMGCS2P54868 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCS2P54868 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 FAM58DP-201ENST00000428076 619 ntBASIC19.84■□□□□ 0.77
HMGCS2P54868 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCS2P54868 RN7SL589P-201ENST00000481268 310 ntBASIC19.84■□□□□ 0.77
HMGCS2P54868 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HMGCS2P54868 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCS2P54868 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCS2P54868 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCS2P54868 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS2P54868 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.84■□□□□ 0.77
HMGCS2P54868 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.84■□□□□ 0.77
HMGCS2P54868 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.84■□□□□ 0.77
HMGCS2P54868 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCS2P54868 AC015911.4-201ENST00000588022 1070 ntBASIC19.84■□□□□ 0.77
HMGCS2P54868 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms