Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDX1P52945 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.84■□□□□ 0.29
PDX1P52945 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.84■□□□□ 0.29
PDX1P52945 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.84■□□□□ 0.29
PDX1P52945 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.84■□□□□ 0.29
PDX1P52945 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.84■□□□□ 0.29
PDX1P52945 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 AC022898.2-201ENST00000616822 1312 ntBASIC16.84■□□□□ 0.29
PDX1P52945 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PDX1P52945 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PDX1P52945 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.84■□□□□ 0.29
PDX1P52945 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.84■□□□□ 0.29
PDX1P52945 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.84■□□□□ 0.29
PDX1P52945 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.84■□□□□ 0.29
PDX1P52945 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDX1P52945 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PDX1P52945 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PDX1P52945 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDX1P52945 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDX1P52945 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDX1P52945 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDX1P52945 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
PDX1P52945 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
PDX1P52945 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDX1P52945 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDX1P52945 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDX1P52945 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDX1P52945 KLF4P1-201ENST00000412782 1185 ntBASIC16.83■□□□□ 0.28
PDX1P52945 NCF1C-201ENST00000438382 1427 ntBASIC16.83■□□□□ 0.28
PDX1P52945 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.83■□□□□ 0.28
PDX1P52945 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDX1P52945 IGHV3-65-201ENST00000523210 341 ntBASIC16.83■□□□□ 0.28
PDX1P52945 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.83■□□□□ 0.28
PDX1P52945 AC018845.2-201ENST00000568326 409 ntBASIC16.83■□□□□ 0.28
PDX1P52945 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PDX1P52945 MIR4751-201ENST00000578027 74 ntBASIC16.83■□□□□ 0.28
PDX1P52945 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.83■□□□□ 0.28
PDX1P52945 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.83■□□□□ 0.28
PDX1P52945 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDX1P52945 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PDX1P52945 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.82■□□□□ 0.28
PDX1P52945 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.82■□□□□ 0.28
PDX1P52945 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.82■□□□□ 0.28
PDX1P52945 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.82■□□□□ 0.28
PDX1P52945 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDX1P52945 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.82■□□□□ 0.28
PDX1P52945 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDX1P52945 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.82■□□□□ 0.28
PDX1P52945 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 HCG4B-203ENST00000450128 991 ntBASIC16.82■□□□□ 0.28
PDX1P52945 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.82■□□□□ 0.28
PDX1P52945 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.82■□□□□ 0.28
PDX1P52945 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 RPS15P9-201ENST00000494093 319 ntBASIC16.82■□□□□ 0.28
PDX1P52945 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 AC008667.4-201ENST00000607370 168 ntBASIC16.82■□□□□ 0.28
PDX1P52945 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.82■□□□□ 0.28
PDX1P52945 AL513190.1-201ENST00000621254 727 ntBASIC16.82■□□□□ 0.28
PDX1P52945 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PDX1P52945 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PDX1P52945 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDX1P52945 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PDX1P52945 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.81■□□□□ 0.28
PDX1P52945 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms