Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GTF2A1P52655 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
GTF2A1P52655 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 AC104417.2-201ENST00000562989 1793 ntBASIC17.03■□□□□ 0.32
GTF2A1P52655 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 AC016769.1-201ENST00000409132 1010 ntBASIC17.03■□□□□ 0.32
GTF2A1P52655 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.03■□□□□ 0.32
GTF2A1P52655 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.03■□□□□ 0.32
GTF2A1P52655 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 AC093787.1-201ENST00000450396 207 ntBASIC17.03■□□□□ 0.32
GTF2A1P52655 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.03■□□□□ 0.32
GTF2A1P52655 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 BID-214ENST00000617586 542 ntTSL 5 BASIC17.03■□□□□ 0.32
GTF2A1P52655 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.03■□□□□ 0.32
GTF2A1P52655 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GTF2A1P52655 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
GTF2A1P52655 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
GTF2A1P52655 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 AC005840.4-201ENST00000541242 2494 ntBASIC17.03■□□□□ 0.32
GTF2A1P52655 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.03■□□□□ 0.32
GTF2A1P52655 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 AC013268.4-201ENST00000637413 2228 ntBASIC17.02■□□□□ 0.32
GTF2A1P52655 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.02■□□□□ 0.32
GTF2A1P52655 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.02■□□□□ 0.32
GTF2A1P52655 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GTF2A1P52655 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GTF2A1P52655 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.02■□□□□ 0.32
GTF2A1P52655 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
GTF2A1P52655 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.02■□□□□ 0.32
GTF2A1P52655 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.02■□□□□ 0.32
GTF2A1P52655 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
GTF2A1P52655 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.02■□□□□ 0.32
GTF2A1P52655 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.02■□□□□ 0.32
GTF2A1P52655 GPX1P1-201ENST00000388829 606 ntBASIC17.02■□□□□ 0.32
GTF2A1P52655 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.02■□□□□ 0.32
GTF2A1P52655 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.02■□□□□ 0.32
GTF2A1P52655 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.02■□□□□ 0.32
GTF2A1P52655 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.02■□□□□ 0.32
GTF2A1P52655 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.02■□□□□ 0.32
GTF2A1P52655 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GTF2A1P52655 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.02■□□□□ 0.31
GTF2A1P52655 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
GTF2A1P52655 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.02■□□□□ 0.31
GTF2A1P52655 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GTF2A1P52655 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GTF2A1P52655 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
GTF2A1P52655 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.02■□□□□ 0.31
GTF2A1P52655 CR383656.2-201ENST00000548656 2254 ntBASIC17.01■□□□□ 0.31
GTF2A1P52655 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GTF2A1P52655 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GTF2A1P52655 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GTF2A1P52655 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GTF2A1P52655 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms