Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SSR4P51571 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.88■□□□□ 0.13
SSR4P51571 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SSR4P51571 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 CRYGEP-201ENST00000412192 528 ntBASIC15.88■□□□□ 0.13
SSR4P51571 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.88■□□□□ 0.13
SSR4P51571 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.88■□□□□ 0.13
SSR4P51571 AC007967.2-201ENST00000432613 625 ntBASIC15.88■□□□□ 0.13
SSR4P51571 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.88■□□□□ 0.13
SSR4P51571 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.88■□□□□ 0.13
SSR4P51571 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.88■□□□□ 0.13
SSR4P51571 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SSR4P51571 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SSR4P51571 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SSR4P51571 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSR4P51571 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.88■□□□□ 0.13
SSR4P51571 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.87■□□□□ 0.13
SSR4P51571 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.87■□□□□ 0.13
SSR4P51571 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SSR4P51571 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSR4P51571 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SSR4P51571 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.87■□□□□ 0.13
SSR4P51571 MRPL20P1-201ENST00000400819 433 ntBASIC15.87■□□□□ 0.13
SSR4P51571 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SSR4P51571 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.87■□□□□ 0.13
SSR4P51571 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
SSR4P51571 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.87■□□□□ 0.13
SSR4P51571 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.87■□□□□ 0.13
SSR4P51571 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.87■□□□□ 0.13
SSR4P51571 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.87■□□□□ 0.13
SSR4P51571 AC004790.2-201ENST00000623588 572 ntBASIC15.87■□□□□ 0.13
SSR4P51571 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SSR4P51571 PI4KAP1-204ENST00000612579 1703 ntBASIC15.87■□□□□ 0.13
SSR4P51571 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SSR4P51571 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SSR4P51571 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR4P51571 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR4P51571 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 AC018470.1-201ENST00000624790 3129 ntBASIC15.86■□□□□ 0.13
SSR4P51571 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SSR4P51571 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.86■□□□□ 0.13
SSR4P51571 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SSR4P51571 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SSR4P51571 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.86■□□□□ 0.13
SSR4P51571 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR4P51571 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.86■□□□□ 0.13
SSR4P51571 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR4P51571 PRSS29P-201ENST00000440800 595 ntBASIC15.86■□□□□ 0.13
SSR4P51571 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR4P51571 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.86■□□□□ 0.13
SSR4P51571 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.86■□□□□ 0.13
SSR4P51571 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR4P51571 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.86■□□□□ 0.13
SSR4P51571 AC064836.3-201ENST00000607928 673 ntBASIC15.86■□□□□ 0.13
SSR4P51571 AC023511.2-201ENST00000618803 211 ntBASIC15.86■□□□□ 0.13
SSR4P51571 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.86■□□□□ 0.13
SSR4P51571 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR4P51571 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.86■□□□□ 0.13
SSR4P51571 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR4P51571 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SSR4P51571 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSR4P51571 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSR4P51571 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms