Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF144AP50876 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RNF144AP50876 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
RNF144AP50876 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF144AP50876 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.14■□□□□ 0.18
RNF144AP50876 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF144AP50876 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
RNF144AP50876 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF144AP50876 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF144AP50876 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF144AP50876 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
RNF144AP50876 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RNF144AP50876 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF144AP50876 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF144AP50876 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RNF144AP50876 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF144AP50876 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 KRT8P10-201ENST00000450021 1447 ntBASIC16.14■□□□□ 0.17
RNF144AP50876 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF144AP50876 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF144AP50876 RCN1P2-201ENST00000398357 915 ntBASIC16.14■□□□□ 0.17
RNF144AP50876 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF144AP50876 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF144AP50876 AC104819.1-201ENST00000504587 486 ntBASIC16.14■□□□□ 0.17
RNF144AP50876 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF144AP50876 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF144AP50876 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF144AP50876 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RNF144AP50876 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF144AP50876 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
RNF144AP50876 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF144AP50876 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF144AP50876 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF144AP50876 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF144AP50876 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF144AP50876 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RNF144AP50876 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF144AP50876 IGHV3-47-201ENST00000425060 335 ntBASIC16.13■□□□□ 0.17
RNF144AP50876 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF144AP50876 HCG4P8-203ENST00000443049 980 ntBASIC16.13■□□□□ 0.17
RNF144AP50876 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.13■□□□□ 0.17
RNF144AP50876 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF144AP50876 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.13■□□□□ 0.17
RNF144AP50876 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF144AP50876 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF144AP50876 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF144AP50876 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 AC097374.2-201ENST00000618617 1306 ntBASIC16.13■□□□□ 0.17
RNF144AP50876 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF144AP50876 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF144AP50876 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF144AP50876 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF144AP50876 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RNF144AP50876 AL121761.2-201ENST00000598007 1648 ntBASIC16.12■□□□□ 0.17
RNF144AP50876 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF144AP50876 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RNF144AP50876 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF144AP50876 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF144AP50876 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF144AP50876 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms