Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CHKAP35790 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHKAP35790 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHKAP35790 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKAP35790 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKAP35790 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKAP35790 COX5BP2-201ENST00000392354 334 ntBASIC18.31■□□□□ 0.52
CHKAP35790 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CHKAP35790 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.31■□□□□ 0.52
CHKAP35790 AC073648.2-201ENST00000510116 352 ntBASIC18.31■□□□□ 0.52
CHKAP35790 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.31■□□□□ 0.52
CHKAP35790 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHKAP35790 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 REXO1L11P-201ENST00000620964 1927 ntBASIC18.31■□□□□ 0.52
CHKAP35790 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHKAP35790 HLA-J-201ENST00000462773 1622 ntBASIC18.31■□□□□ 0.52
CHKAP35790 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHKAP35790 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHKAP35790 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.3■□□□□ 0.52
CHKAP35790 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.3■□□□□ 0.52
CHKAP35790 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHKAP35790 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHKAP35790 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.3■□□□□ 0.52
CHKAP35790 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.3■□□□□ 0.52
CHKAP35790 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.3■□□□□ 0.52
CHKAP35790 AP001005.1-201ENST00000571755 1248 ntBASIC18.3■□□□□ 0.52
CHKAP35790 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.3■□□□□ 0.52
CHKAP35790 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.3■□□□□ 0.52
CHKAP35790 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.3■□□□□ 0.52
CHKAP35790 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.3■□□□□ 0.52
CHKAP35790 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CHKAP35790 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
CHKAP35790 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
CHKAP35790 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.3■□□□□ 0.52
CHKAP35790 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHKAP35790 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHKAP35790 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 HLA-A-201ENST00000376802 1334 ntBASIC18.29■□□□□ 0.52
CHKAP35790 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKAP35790 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKAP35790 AC009949.1-201ENST00000623048 1830 ntBASIC18.29■□□□□ 0.52
CHKAP35790 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKAP35790 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHKAP35790 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.29■□□□□ 0.52
CHKAP35790 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHKAP35790 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKAP35790 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.29■□□□□ 0.52
CHKAP35790 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 AP000867.4-201ENST00000641616 219 ntBASIC18.29■□□□□ 0.52
CHKAP35790 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHKAP35790 AL121761.2-201ENST00000598007 1648 ntBASIC18.29■□□□□ 0.52
CHKAP35790 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.29■□□□□ 0.52
CHKAP35790 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHKAP35790 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.29■□□□□ 0.52
CHKAP35790 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHKAP35790 AL356309.3-201ENST00000624132 1934 ntBASIC18.29■□□□□ 0.52
CHKAP35790 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHKAP35790 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHKAP35790 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CHKAP35790 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CHKAP35790 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHKAP35790 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms