Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 AL662844.4-201ENST00000606367 2838 ntBASIC16.9■□□□□ 0.3
EPHA3P29320 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.9■□□□□ 0.3
EPHA3P29320 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.9■□□□□ 0.3
EPHA3P29320 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EPHA3P29320 AC068472.1-201ENST00000474589 881 ntBASIC16.9■□□□□ 0.3
EPHA3P29320 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.9■□□□□ 0.3
EPHA3P29320 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
EPHA3P29320 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.9■□□□□ 0.3
EPHA3P29320 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
EPHA3P29320 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.9■□□□□ 0.3
EPHA3P29320 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
EPHA3P29320 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EPHA3P29320 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
EPHA3P29320 AC010460.3-201ENST00000511359 1579 ntBASIC16.89■□□□□ 0.3
EPHA3P29320 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.89■□□□□ 0.3
EPHA3P29320 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.3
EPHA3P29320 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
EPHA3P29320 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.89■□□□□ 0.29
EPHA3P29320 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
EPHA3P29320 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.89■□□□□ 0.29
EPHA3P29320 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
EPHA3P29320 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 IGHGP-201ENST00000390555 1178 ntBASIC16.89■□□□□ 0.29
EPHA3P29320 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.89■□□□□ 0.29
EPHA3P29320 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.89■□□□□ 0.29
EPHA3P29320 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHA3P29320 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.89■□□□□ 0.29
EPHA3P29320 AL353692.3-201ENST00000407031 1396 ntBASIC16.89■□□□□ 0.29
EPHA3P29320 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
EPHA3P29320 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.88■□□□□ 0.29
EPHA3P29320 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
EPHA3P29320 SPDYE15P-201ENST00000424157 909 ntBASIC16.88■□□□□ 0.29
EPHA3P29320 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 AC006449.5-201ENST00000610658 2098 ntBASIC16.88■□□□□ 0.29
EPHA3P29320 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
EPHA3P29320 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
EPHA3P29320 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA3P29320 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA3P29320 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA3P29320 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.87■□□□□ 0.29
EPHA3P29320 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms