Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
GDF1P27539 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
GDF1P27539 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.72■□□□□ 0.11
GDF1P27539 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.72■□□□□ 0.11
GDF1P27539 LYSMD4-203ENST00000378904 2122 ntBASIC15.72■□□□□ 0.11
GDF1P27539 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.72■□□□□ 0.11
GDF1P27539 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 MED15P5-201ENST00000423150 992 ntBASIC15.72■□□□□ 0.11
GDF1P27539 ACTG1P4-201ENST00000425123 1122 ntBASIC15.72■□□□□ 0.11
GDF1P27539 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.72■□□□□ 0.11
GDF1P27539 AC108751.1-201ENST00000490852 363 ntBASIC15.72■□□□□ 0.11
GDF1P27539 POLD2P1-201ENST00000511220 997 ntBASIC15.72■□□□□ 0.11
GDF1P27539 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.72■□□□□ 0.11
GDF1P27539 AC034105.1-201ENST00000563488 319 ntBASIC15.72■□□□□ 0.11
GDF1P27539 AL671883.3-201ENST00000603274 991 ntBASIC15.72■□□□□ 0.11
GDF1P27539 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.72■□□□□ 0.11
GDF1P27539 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.72■□□□□ 0.11
GDF1P27539 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.72■□□□□ 0.11
GDF1P27539 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.72■□□□□ 0.11
GDF1P27539 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.72■□□□□ 0.11
GDF1P27539 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.72■□□□□ 0.11
GDF1P27539 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.72■□□□□ 0.11
GDF1P27539 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
GDF1P27539 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
GDF1P27539 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GDF1P27539 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 RPS15P9-201ENST00000494093 319 ntBASIC15.71■□□□□ 0.11
GDF1P27539 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
GDF1P27539 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 AL353135.1-201ENST00000606729 504 ntBASIC15.71■□□□□ 0.11
GDF1P27539 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
GDF1P27539 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDF1P27539 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
GDF1P27539 AC134043.2-201ENST00000624206 2238 ntBASIC15.71■□□□□ 0.1
GDF1P27539 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
GDF1P27539 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
GDF1P27539 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.71■□□□□ 0.1
GDF1P27539 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
GDF1P27539 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GDF1P27539 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.7■□□□□ 0.1
GDF1P27539 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GDF1P27539 AC009947.1-201ENST00000444350 727 ntBASIC15.7■□□□□ 0.1
GDF1P27539 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.7■□□□□ 0.1
GDF1P27539 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.7■□□□□ 0.1
GDF1P27539 MIR4751-201ENST00000578027 74 ntBASIC15.7■□□□□ 0.1
GDF1P27539 AC140113.2-201ENST00000604370 208 ntBASIC15.7■□□□□ 0.1
GDF1P27539 AC027601.4-201ENST00000611259 610 ntBASIC15.7■□□□□ 0.1
GDF1P27539 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
GDF1P27539 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.7■□□□□ 0.1
GDF1P27539 GPR89P-201ENST00000407924 1495 ntBASIC15.7■□□□□ 0.1
GDF1P27539 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.7■□□□□ 0.1
GDF1P27539 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GDF1P27539 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.7■□□□□ 0.1
GDF1P27539 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GDF1P27539 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms