Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 SPDYE21P-201ENST00000413323 827 ntBASIC14.85□□□□□ -0.03
TNFSF4P23510 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 FGFR3P6-201ENST00000457012 610 ntBASIC14.85□□□□□ -0.03
TNFSF4P23510 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.85□□□□□ -0.03
TNFSF4P23510 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.85□□□□□ -0.03
TNFSF4P23510 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 AF238378.1-201ENST00000526806 358 ntBASIC14.85□□□□□ -0.03
TNFSF4P23510 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.85□□□□□ -0.03
TNFSF4P23510 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.85□□□□□ -0.03
TNFSF4P23510 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 AL139327.4-201ENST00000612362 153 ntBASIC14.85□□□□□ -0.03
TNFSF4P23510 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.85□□□□□ -0.03
TNFSF4P23510 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 AL355312.1-201ENST00000407115 2176 ntBASIC14.85□□□□□ -0.03
TNFSF4P23510 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 SIGLEC16-201ENST00000599858 1437 ntBASIC14.84□□□□□ -0.03
TNFSF4P23510 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TNFSF4P23510 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TNFSF4P23510 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TNFSF4P23510 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.84□□□□□ -0.03
TNFSF4P23510 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFSF4P23510 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFSF4P23510 AL022326.1-202ENST00000641533 845 ntBASIC14.84□□□□□ -0.03
TNFSF4P23510 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 AC009336.1-201ENST00000608941 1553 ntBASIC14.84□□□□□ -0.03
TNFSF4P23510 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFSF4P23510 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TNFSF4P23510 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
TNFSF4P23510 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFSF4P23510 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFSF4P23510 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFSF4P23510 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFSF4P23510 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFSF4P23510 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.83□□□□□ -0.03
TNFSF4P23510 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFSF4P23510 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TNFSF4P23510 AC132938.5-201ENST00000624980 1813 ntBASIC14.83□□□□□ -0.04
TNFSF4P23510 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFSF4P23510 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFSF4P23510 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFSF4P23510 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFSF4P23510 AL662844.1-201ENST00000546340 181 ntBASIC14.83□□□□□ -0.04
TNFSF4P23510 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF4P23510 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms