Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 AC007663.1-201ENST00000438948 1240 ntBASIC15.22■□□□□ 0.03
RAB3BP20337 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.22■□□□□ 0.03
RAB3BP20337 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3BP20337 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB3BP20337 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3BP20337 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3BP20337 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3BP20337 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3BP20337 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
RAB3BP20337 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3BP20337 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3BP20337 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3BP20337 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAB3BP20337 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3BP20337 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
RAB3BP20337 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RAB3BP20337 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 AC090192.1-201ENST00000517740 490 ntBASIC15.21■□□□□ 0.03
RAB3BP20337 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3BP20337 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3BP20337 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
RAB3BP20337 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3BP20337 AC022188.1-201ENST00000620960 1664 ntBASIC15.21■□□□□ 0.03
RAB3BP20337 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3BP20337 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3BP20337 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB3BP20337 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB3BP20337 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RAB3BP20337 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB3BP20337 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB3BP20337 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
RAB3BP20337 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3BP20337 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3BP20337 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3BP20337 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3BP20337 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3BP20337 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3BP20337 KRT8P9-201ENST00000558927 1449 ntBASIC15.2■□□□□ 0.02
RAB3BP20337 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3BP20337 AL662844.4-201ENST00000606367 2838 ntBASIC15.2■□□□□ 0.02
RAB3BP20337 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RAB3BP20337 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms