Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CCL3L1P16619 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL3L1P16619 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 AL139288.1-201ENST00000623748 933 ntBASIC14.32□□□□□ -0.12
CCL3L1P16619 AC073592.4-201ENST00000623827 446 ntBASIC14.32□□□□□ -0.12
CCL3L1P16619 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL3L1P16619 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 AL023806.1-201ENST00000603994 1649 ntBASIC14.32□□□□□ -0.12
CCL3L1P16619 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CCL3L1P16619 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCL3L1P16619 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCL3L1P16619 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL3L1P16619 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCL3L1P16619 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.31□□□□□ -0.12
CCL3L1P16619 AL121912.1-201ENST00000603683 238 ntBASIC14.31□□□□□ -0.12
CCL3L1P16619 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 AL031008.1-201ENST00000619963 541 ntBASIC14.31□□□□□ -0.12
CCL3L1P16619 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 TP73-AS1-207ENST00000624167 988 ntBASIC14.31□□□□□ -0.12
CCL3L1P16619 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CCL3L1P16619 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CCL3L1P16619 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL3L1P16619 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL3L1P16619 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL3L1P16619 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 AC108860.2-201ENST00000562760 2183 ntBASIC14.3□□□□□ -0.12
CCL3L1P16619 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCL3L1P16619 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.3□□□□□ -0.12
CCL3L1P16619 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 SCARNA2-201ENST00000458748 420 ntBASIC14.3□□□□□ -0.12
CCL3L1P16619 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.3□□□□□ -0.12
CCL3L1P16619 AL121894.2-201ENST00000602977 491 ntBASIC14.3□□□□□ -0.12
CCL3L1P16619 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL3L1P16619 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 AL022326.1-202ENST00000641533 845 ntBASIC14.3□□□□□ -0.12
CCL3L1P16619 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms