Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CTSBP07858 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 AL138688.1-201ENST00000624851 1594 ntBASIC16.36■□□□□ 0.21
CTSBP07858 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CTSBP07858 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CTSBP07858 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.36■□□□□ 0.21
CTSBP07858 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.36■□□□□ 0.21
CTSBP07858 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CTSBP07858 SLC25A6P2-201ENST00000497974 877 ntBASIC16.36■□□□□ 0.21
CTSBP07858 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
CTSBP07858 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.36■□□□□ 0.21
CTSBP07858 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSBP07858 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSBP07858 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CTSBP07858 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.36■□□□□ 0.21
CTSBP07858 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSBP07858 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CTSBP07858 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSBP07858 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.36■□□□□ 0.21
CTSBP07858 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CTSBP07858 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CTSBP07858 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 MRPL20P1-201ENST00000400819 433 ntBASIC16.35■□□□□ 0.21
CTSBP07858 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CTSBP07858 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 PAWRP1-201ENST00000451083 565 ntBASIC16.35■□□□□ 0.21
CTSBP07858 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.35■□□□□ 0.21
CTSBP07858 RNA5SP416-201ENST00000516838 111 ntBASIC16.35■□□□□ 0.21
CTSBP07858 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 AL513190.1-201ENST00000621254 727 ntBASIC16.35■□□□□ 0.21
CTSBP07858 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.35■□□□□ 0.21
CTSBP07858 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSBP07858 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.35■□□□□ 0.21
CTSBP07858 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSBP07858 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
CTSBP07858 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.34■□□□□ 0.21
CTSBP07858 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
CTSBP07858 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CTSBP07858 AC139713.2-201ENST00000641328 2723 ntBASIC16.34■□□□□ 0.21
CTSBP07858 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.34■□□□□ 0.21
CTSBP07858 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.34■□□□□ 0.21
CTSBP07858 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.34■□□□□ 0.21
CTSBP07858 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.34■□□□□ 0.21
CTSBP07858 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CTSBP07858 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.34■□□□□ 0.21
CTSBP07858 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CTSBP07858 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSBP07858 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms