Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 AC005915.1-201ENST00000624912 2018 ntBASIC15.62■□□□□ 0.09
HLA-DPB1P04440 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.62■□□□□ 0.09
HLA-DPB1P04440 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPB1P04440 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 LINC00167-201ENST00000530583 1419 ntBASIC15.61■□□□□ 0.09
HLA-DPB1P04440 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 AC116353.5-201ENST00000638148 1699 ntBASIC15.61■□□□□ 0.09
HLA-DPB1P04440 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 STARP1-201ENST00000397973 869 ntBASIC15.61■□□□□ 0.09
HLA-DPB1P04440 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 FAM210CP-201ENST00000445714 574 ntBASIC15.61■□□□□ 0.09
HLA-DPB1P04440 KRT18P38-201ENST00000449496 1282 ntBASIC15.61■□□□□ 0.09
HLA-DPB1P04440 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 AC079602.3-201ENST00000623931 403 ntBASIC15.61■□□□□ 0.09
HLA-DPB1P04440 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPB1P04440 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms