Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
KRT6AP02538 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT6AP02538 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT6AP02538 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
KRT6AP02538 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 AC046158.3-201ENST00000624947 2558 ntBASIC16.82■□□□□ 0.28
KRT6AP02538 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT6AP02538 AL031133.1-201ENST00000406807 723 ntBASIC16.82■□□□□ 0.28
KRT6AP02538 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
KRT6AP02538 CHCHD2P8-201ENST00000429873 447 ntBASIC16.82■□□□□ 0.28
KRT6AP02538 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT6AP02538 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT6AP02538 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT6AP02538 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6AP02538 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT6AP02538 LINC02012-201ENST00000608206 1725 ntBASIC16.82■□□□□ 0.28
KRT6AP02538 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KRT6AP02538 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 AL049757.1-201ENST00000616842 1596 ntBASIC16.81■□□□□ 0.28
KRT6AP02538 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KRT6AP02538 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KRT6AP02538 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT6AP02538 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
KRT6AP02538 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KRT6AP02538 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT6AP02538 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT6AP02538 KRT18P21-201ENST00000515767 1272 ntBASIC16.81■□□□□ 0.28
KRT6AP02538 AL049597.2-201ENST00000565575 961 ntBASIC16.81■□□□□ 0.28
KRT6AP02538 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT6AP02538 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
KRT6AP02538 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6AP02538 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT6AP02538 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT6AP02538 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT6AP02538 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
KRT6AP02538 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT6AP02538 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 NKILA-202ENST00000614771 2598 ntBASIC16.8■□□□□ 0.28
KRT6AP02538 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT6AP02538 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT6AP02538 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT6AP02538 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.8■□□□□ 0.28
KRT6AP02538 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT6AP02538 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
KRT6AP02538 NTF6B-201ENST00000591913 560 ntBASIC16.8■□□□□ 0.28
KRT6AP02538 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms