Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CD4P01730 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.06■□□□□ 0.64
CD4P01730 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.06■□□□□ 0.64
CD4P01730 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.06■□□□□ 0.64
CD4P01730 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.06■□□□□ 0.64
CD4P01730 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.06■□□□□ 0.64
CD4P01730 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.06■□□□□ 0.64
CD4P01730 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.06■□□□□ 0.64
CD4P01730 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.06■□□□□ 0.64
CD4P01730 AC026120.1-201ENST00000611536 926 ntBASIC19.06■□□□□ 0.64
CD4P01730 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.06■□□□□ 0.64
CD4P01730 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CD4P01730 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD4P01730 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.05■□□□□ 0.64
CD4P01730 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CD4P01730 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 AC002056.1-201ENST00000395613 760 ntBASIC19.05■□□□□ 0.64
CD4P01730 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.05■□□□□ 0.64
CD4P01730 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.05■□□□□ 0.64
CD4P01730 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.05■□□□□ 0.64
CD4P01730 DUX4L27-201ENST00000554796 1261 ntBASIC19.05■□□□□ 0.64
CD4P01730 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.05■□□□□ 0.64
CD4P01730 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.05■□□□□ 0.64
CD4P01730 AC099522.2-201ENST00000607001 744 ntBASIC19.05■□□□□ 0.64
CD4P01730 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.05■□□□□ 0.64
CD4P01730 Z92544.3-201ENST00000624747 417 ntBASIC19.05■□□□□ 0.64
CD4P01730 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.05■□□□□ 0.64
CD4P01730 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.05■□□□□ 0.64
CD4P01730 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD4P01730 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.05■□□□□ 0.64
CD4P01730 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.04■□□□□ 0.64
CD4P01730 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.04■□□□□ 0.64
CD4P01730 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.04■□□□□ 0.64
CD4P01730 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.04■□□□□ 0.64
CD4P01730 AL355306.1-201ENST00000415580 579 ntBASIC19.04■□□□□ 0.64
CD4P01730 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.04■□□□□ 0.64
CD4P01730 TIMM8BP1-201ENST00000452384 211 ntBASIC19.04■□□□□ 0.64
CD4P01730 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 AC067863.1-201ENST00000494933 530 ntBASIC19.04■□□□□ 0.64
CD4P01730 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.04■□□□□ 0.64
CD4P01730 KRT8P48-201ENST00000515599 1220 ntBASIC19.04■□□□□ 0.64
CD4P01730 RNA5SP421-201ENST00000516864 134 ntBASIC19.04■□□□□ 0.64
CD4P01730 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 AC069262.1-201ENST00000539058 672 ntBASIC19.04■□□□□ 0.64
CD4P01730 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
CD4P01730 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.04■□□□□ 0.64
CD4P01730 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.04■□□□□ 0.64
CD4P01730 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD4P01730 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CD4P01730 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms