Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.79■□□□□ 0.44
MT-CO1P00395 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.79■□□□□ 0.44
MT-CO1P00395 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.79■□□□□ 0.44
MT-CO1P00395 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-CO1P00395 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MT-CO1P00395 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-CO1P00395 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-CO1P00395 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-CO1P00395 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-CO1P00395 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MT-CO1P00395 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-CO1P00395 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MT-CO1P00395 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-CO1P00395 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-CO1P00395 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-CO1P00395 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.78■□□□□ 0.44
MT-CO1P00395 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 AL590627.1-203ENST00000421194 1026 ntBASIC17.78■□□□□ 0.44
MT-CO1P00395 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MT-CO1P00395 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-CO1P00395 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-CO1P00395 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MT-CO1P00395 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.78■□□□□ 0.44
MT-CO1P00395 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.78■□□□□ 0.44
MT-CO1P00395 AC116407.3-201ENST00000623905 1129 ntBASIC17.78■□□□□ 0.44
MT-CO1P00395 AC107918.4-202ENST00000641623 219 ntBASIC17.78■□□□□ 0.44
MT-CO1P00395 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MT-CO1P00395 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO1P00395 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MT-CO1P00395 AC009336.1-201ENST00000608941 1553 ntBASIC17.78■□□□□ 0.44
MT-CO1P00395 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
MT-CO1P00395 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-CO1P00395 IL9RP2-201ENST00000423948 1312 ntBASIC17.77■□□□□ 0.44
MT-CO1P00395 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.77■□□□□ 0.44
MT-CO1P00395 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-CO1P00395 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-CO1P00395 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.77■□□□□ 0.44
MT-CO1P00395 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.77■□□□□ 0.44
MT-CO1P00395 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-CO1P00395 AC139887.3-201ENST00000568585 713 ntBASIC17.77■□□□□ 0.44
MT-CO1P00395 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.77■□□□□ 0.44
MT-CO1P00395 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
MT-CO1P00395 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.77■□□□□ 0.44
MT-CO1P00395 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-CO1P00395 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.77■□□□□ 0.44
MT-CO1P00395 BX640515.1-201ENST00000617215 977 ntBASIC17.77■□□□□ 0.44
MT-CO1P00395 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.77■□□□□ 0.44
MT-CO1P00395 LINC01451-201ENST00000623792 534 ntBASIC17.77■□□□□ 0.44
MT-CO1P00395 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
MT-CO1P00395 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-CO1P00395 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
MT-CO1P00395 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-CO1P00395 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-CO1P00395 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.77■□□□□ 0.43
MT-CO1P00395 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MT-CO1P00395 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.77■□□□□ 0.43
MT-CO1P00395 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MT-CO1P00395 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MT-CO1P00395 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.77■□□□□ 0.43
MT-CO1P00395 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MT-CO1P00395 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-CO1P00395 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-CO1P00395 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MT-CO1P00395 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
MT-CO1P00395 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-CO1P00395 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms