Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC22.69■■□□□ 1.22
LTN1O94822 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.68■■□□□ 1.22
LTN1O94822 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.68■■□□□ 1.22
LTN1O94822 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC22.68■■□□□ 1.22
LTN1O94822 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC22.68■■□□□ 1.22
LTN1O94822 MRPS18AP1-201ENST00000414458 589 ntBASIC22.68■■□□□ 1.22
LTN1O94822 AC055876.3-201ENST00000431496 288 ntBASIC22.68■■□□□ 1.22
LTN1O94822 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 AP000842.3-202ENST00000569238 1080 ntBASIC22.68■■□□□ 1.22
LTN1O94822 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.68■■□□□ 1.22
LTN1O94822 AC138649.4-201ENST00000612222 287 ntBASIC22.68■■□□□ 1.22
LTN1O94822 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC22.68■■□□□ 1.22
LTN1O94822 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.68■■□□□ 1.22
LTN1O94822 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC22.68■■□□□ 1.22
LTN1O94822 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC22.68■■□□□ 1.22
LTN1O94822 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.68■■□□□ 1.22
LTN1O94822 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LTN1O94822 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.68■■□□□ 1.22
LTN1O94822 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC22.68■■□□□ 1.22
LTN1O94822 ALG1L8P-201ENST00000533887 760 ntBASIC22.68■■□□□ 1.22
LTN1O94822 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.68■■□□□ 1.22
LTN1O94822 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
LTN1O94822 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LTN1O94822 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LTN1O94822 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTN1O94822 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTN1O94822 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.67■■□□□ 1.22
LTN1O94822 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTN1O94822 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
LTN1O94822 VMA21-202ENST00000370361 693 ntTSL 5 BASIC22.67■■□□□ 1.22
LTN1O94822 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTN1O94822 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTN1O94822 MIR4745-201ENST00000577608 62 ntBASIC22.67■■□□□ 1.22
LTN1O94822 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC22.67■■□□□ 1.22
LTN1O94822 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
LTN1O94822 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTN1O94822 AC016027.1-202ENST00000607927 1699 ntBASIC22.67■■□□□ 1.22
LTN1O94822 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
LTN1O94822 AC131009.4-201ENST00000624048 1740 ntBASIC22.67■■□□□ 1.22
LTN1O94822 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
LTN1O94822 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.66■■□□□ 1.22
LTN1O94822 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.66■■□□□ 1.22
LTN1O94822 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.66■■□□□ 1.22
LTN1O94822 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.66■■□□□ 1.22
LTN1O94822 AC091167.2-201ENST00000579581 588 ntBASIC22.66■■□□□ 1.22
LTN1O94822 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.66■■□□□ 1.22
LTN1O94822 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
LTN1O94822 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.66■■□□□ 1.22
LTN1O94822 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.66■■□□□ 1.22
LTN1O94822 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
LTN1O94822 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC22.66■■□□□ 1.22
LTN1O94822 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.66■■□□□ 1.22
LTN1O94822 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC22.66■■□□□ 1.22
LTN1O94822 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 DUT-210ENST00000559935 569 ntTSL 3 BASIC22.66■■□□□ 1.22
LTN1O94822 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LTN1O94822 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LTN1O94822 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LTN1O94822 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.65■■□□□ 1.22
LTN1O94822 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
LTN1O94822 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LTN1O94822 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LTN1O94822 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC22.65■■□□□ 1.22
LTN1O94822 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.65■■□□□ 1.22
LTN1O94822 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.65■■□□□ 1.22
LTN1O94822 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC22.65■■□□□ 1.22
LTN1O94822 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LTN1O94822 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.65■■□□□ 1.22
LTN1O94822 LINC01225-203ENST00000563550 1244 ntBASIC22.65■■□□□ 1.22
LTN1O94822 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LTN1O94822 RN7SL204P-201ENST00000582831 262 ntBASIC22.65■■□□□ 1.22
LTN1O94822 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms