Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN5O75503 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN5O75503 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN5O75503 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLN5O75503 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN5O75503 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN5O75503 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN5O75503 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 AC024909.3-201ENST00000611513 2257 ntBASIC14.21□□□□□ -0.13
CLN5O75503 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLN5O75503 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 TSPY14P-201ENST00000303979 915 ntBASIC14.21□□□□□ -0.13
CLN5O75503 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.21□□□□□ -0.13
CLN5O75503 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN5O75503 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.21□□□□□ -0.13
CLN5O75503 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 AC128688.1-201ENST00000487626 519 ntBASIC14.21□□□□□ -0.13
CLN5O75503 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 EGLN1P1-201ENST00000531623 762 ntBASIC14.21□□□□□ -0.13
CLN5O75503 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CLN5O75503 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN5O75503 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 AC007950.2-201ENST00000615045 2347 ntBASIC14.21□□□□□ -0.13
CLN5O75503 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CLN5O75503 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN5O75503 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN5O75503 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN5O75503 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.21□□□□□ -0.14
CLN5O75503 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN5O75503 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CLN5O75503 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN5O75503 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN5O75503 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CLN5O75503 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN5O75503 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.21□□□□□ -0.14
CLN5O75503 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN5O75503 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN5O75503 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLN5O75503 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.2□□□□□ -0.14
CLN5O75503 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.2□□□□□ -0.14
CLN5O75503 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN5O75503 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN5O75503 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLN5O75503 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.2□□□□□ -0.14
CLN5O75503 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
CLN5O75503 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.2□□□□□ -0.14
CLN5O75503 SNORA78-201ENST00000459373 127 ntBASIC14.2□□□□□ -0.14
CLN5O75503 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN5O75503 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLN5O75503 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN5O75503 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLN5O75503 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN5O75503 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLN5O75503 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.2□□□□□ -0.14
CLN5O75503 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN5O75503 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms