Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CNOT3O75175 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CNOT3O75175 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT3O75175 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 NFIC-211ENST00000641145 8399 ntBASIC16.87■□□□□ 0.29
CNOT3O75175 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT3O75175 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CNOT3O75175 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.86■□□□□ 0.29
CNOT3O75175 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 INTS4P1-201ENST00000438455 1935 ntBASIC16.86■□□□□ 0.29
CNOT3O75175 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.86■□□□□ 0.29
CNOT3O75175 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CNOT3O75175 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.86■□□□□ 0.29
CNOT3O75175 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CNOT3O75175 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CNOT3O75175 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CNOT3O75175 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT3O75175 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CNOT3O75175 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CNOT3O75175 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.85■□□□□ 0.29
CNOT3O75175 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.85■□□□□ 0.29
CNOT3O75175 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CNOT3O75175 AC011467.2-201ENST00000598425 242 ntBASIC16.85■□□□□ 0.29
CNOT3O75175 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.85■□□□□ 0.29
CNOT3O75175 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.85■□□□□ 0.29
CNOT3O75175 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.85■□□□□ 0.29
CNOT3O75175 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 AC093010.1-201ENST00000473625 1624 ntBASIC16.85■□□□□ 0.29
CNOT3O75175 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CNOT3O75175 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT3O75175 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.85■□□□□ 0.29
CNOT3O75175 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms