Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PFDN1O60925 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PFDN1O60925 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PFDN1O60925 KRT87P-202ENST00000534226 1464 ntBASIC15.47■□□□□ 0.07
PFDN1O60925 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 UNC93B8-201ENST00000511903 705 ntBASIC15.47■□□□□ 0.07
PFDN1O60925 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 LINC00304-203ENST00000565008 1864 ntBASIC15.47■□□□□ 0.07
PFDN1O60925 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.47■□□□□ 0.07
PFDN1O60925 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 AC068587.9-201ENST00000641814 219 ntBASIC15.47■□□□□ 0.07
PFDN1O60925 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 AC007292.2-201ENST00000593524 1812 ntBASIC15.47■□□□□ 0.07
PFDN1O60925 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.47■□□□□ 0.07
PFDN1O60925 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.47■□□□□ 0.07
PFDN1O60925 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 AC023157.3-201ENST00000619086 2088 ntBASIC15.47■□□□□ 0.07
PFDN1O60925 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PFDN1O60925 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PFDN1O60925 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.46■□□□□ 0.07
PFDN1O60925 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.46■□□□□ 0.07
PFDN1O60925 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.46■□□□□ 0.07
PFDN1O60925 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.46■□□□□ 0.07
PFDN1O60925 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.46■□□□□ 0.07
PFDN1O60925 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PFDN1O60925 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PFDN1O60925 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.46■□□□□ 0.07
PFDN1O60925 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.46■□□□□ 0.07
PFDN1O60925 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.46■□□□□ 0.07
PFDN1O60925 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.46■□□□□ 0.07
PFDN1O60925 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.46■□□□□ 0.07
PFDN1O60925 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.46■□□□□ 0.07
PFDN1O60925 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.46■□□□□ 0.07
PFDN1O60925 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PFDN1O60925 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PFDN1O60925 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
PFDN1O60925 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PFDN1O60925 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PFDN1O60925 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.46■□□□□ 0.06
PFDN1O60925 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PFDN1O60925 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PFDN1O60925 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
PFDN1O60925 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PFDN1O60925 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.45■□□□□ 0.06
PFDN1O60925 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
PFDN1O60925 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms